rfmm_79316.1

From referenceTSS
Revision as of 13:40, 27 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000212780.2) |ccre_category=N |ccre_description=N |chr=chr8 |cpg_percent=0.097561 |detailed_annotation=lncRNA-promoter-TSS (EN...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_79316.1
Species:mouse
Chr:chr8
Start:71479232
End:71479274
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000212780.2 AK029875
Distance:162
GeneID:100042057
HGNC/MGI_ID:MGI:3781819 MGI:5594415
UniProt_ID:
Gene_name:predicted gene 3643; predicted gene, 35256
Gene_symbol:Gm35256 Gm3643
Gene_synonyms:
Gene_source:MGI:3781819 MGI:5594415



TATA-Box annotation


Distance to TSS:146
Nearest PromoterID:ENSMUST00000188626.2
Entrez ID:ENSMUSG00000101854
Nearest Unigene:ENSMUST00000170101
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene 3643; predicted gene, 35256
Gene Alias:
Gene Description:
Gene Type:lncRNA
CpG%:0.097561
GC%:0.690476
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.