rfmm_90363.1

From referenceTSS
Revision as of 17:38, 27 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000055433.5) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EM10D2966016,EM10E1225286) |chr=chr9 |cpg_percent=0.043478 |...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfmm_90363.1
Species:mouse
Chr:chr9
Start:96901097
End:96901121
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation

Description:PLS,CTCF-bound (EM10D2966016,EM10E1225286)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:LF202929:191
MA438506:191
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:-213
    Nearest PromoterID:ENSMUST00000055433.5
    Entrez ID:ENSMUSG00000046997
    Nearest Unigene:ENSMUST00000162307
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.043478
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfmm_90363.1&oldid=2317963"