rfmm_3647.1

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Basic information about the TSS


TSS ID:rfmm_3647.1
Species:mouse
Chr:chr1
Start:77491686
End:77491739
Strand:-
Source datasets
Protocol
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1069845,EM10E0442502)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000027451.13:0
ENSMUST00000188952.7:0
ENSMUST00000188797.7:0
ENSMUST00000190149.7:0
ENSMUST00000189934.2:0
ENSMUST00000186930.2:0
AK147698:0
BC052164:0
AK028509:0
S57168:0
X65138:0
AK132203:0
GeneID:13838
HGNC/MGI_ID:MGI:98277
UniProt_ID:A0A087WQW6 A0A087WQZ6 Q03137 Q3V1W9
Nearer transcript ids and distances:
    Gene_name:Epha4
    Gene_symbol:Epha4
    Gene_synonyms:2900005C20Rik Cek8 Hek8 Sek Sek1 Tyro1 rb
    Gene_source:MGI:98277



    TATA-Box annotation


    Distance to TSS:13
    Nearest PromoterID:NM_007936.3
    Entrez ID:Epha4
    Nearest Unigene:NM_007936
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Epha4
    Gene Alias:
    Gene Type:
    CpG%:0.018868
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.