rfhg_113948.1

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Basic information about the TSS


TSS ID:rfhg_113948.1
TSS ID(Version3):hg_96272.1
hg_96271.1
Species:human
Chr:chr9
Start:20684249
End:20684291
Strand:+
Source datasetsFANTOM5|PRJNA401781|PRJDB5282|PRJNA4843412|DRA013844
|PRJNA548673|PRJNA615891
ProtocolCAGE|RAMPAGE|C1CAGE|NETCAGE|ReCappable-seq|SLIC_CAGE
|TIF-seq2
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4178823,EH38E2686554)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001375570.1:0
NM_001375568.1:0
NM_001375567.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:FOCAD-AS1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:480
    Nearest PromoterID:NR_121601
    Entrez ID:101929548
    Nearest Unigene:Hs.668302
    Nearest Refseq:NR_121601
    Nearest Ensembl:ENSG00000227071
    Gene Name:FOCAD-AS1
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.071429
    GC%:0.697674
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):