rfhg_12473.1

Basic information about the TSS

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TSS ID: rfhg_12473.1 TSS ID(Version3): hg_5216.1 Species: human Chr: chr1		Start: 151198523 End: 151198607 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA4843412|DRA013844 |PRJNA615891|PRJNA401781|PRJNA548673|PRJDB5282|PRJNA597322
Protocol	CAGE|TSS_database|NETCAGE|SLIC_CAGE|RAMPAGE|ReCappable-seq |oligo_capping|C1CAGE|STRIPE-seq|TIF-seq2
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2221891,EH38E1384138)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000349792.9:0 ENST00000409426.5:0 ENST00000368888.9:0 ENST00000441902.6:0 ENST00000368890.8:0 ENST00000424999.1:0 AK309826:0 AK295691:0 BC007833:0 U78576:0 U78577:0 U78575:0 AK291015:0 GeneID: 8394 HGNC/MGI_ID: HGNC:8994 UniProt_ID: A6PW56 A6PW57 Q99755 Nearer transcript ids and distances:

Gene_name: PIP5K1A Gene_symbol: PIP5K1A Gene_synonyms: Gene_source: HGNC:8994

TATA-Box annotation

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Distance to TSS:	13
Nearest PromoterID:	NM_001135636
Entrez ID:	8394
Nearest Unigene:	Hs.655131
Nearest Refseq:	NM_003557
Nearest Ensembl:	ENSG00000143398
Gene Name:	PIP5K1A
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.107143
GC%:	0.623529
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.