rfhg_130849.1

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Basic information about the TSS


TSS ID:rfhg_130849.1
TSS ID(Version3):hg_232130.1
hg_111671.1
hg_111672.1
Species:human
Chr:chr10
Start:119080706
End:119080883
Strand:-
Source datasetsDRA000914|PRJDB5282|PRJNA4843412|DRA013844|PRJNA401781
|PRJNA615891|PRJNA548673|PRJNA597322
ProtocolCAGE|C1CAGE|NETCAGE|SLIC_CAGE|TIF-seq2|ReCappable-seq
|RAMPAGE|oligo_capping|STRIPE-seq
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2398123,EH38E1504064)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000369144.8:0
D50929:0
U58046:0
U78311:0
BC114429:0
JX312508:0
AK309542:0
AK307610:0
BC054342:0
BC064926:0
BC107776:0
BC033769:0
GeneID:8661
HGNC/MGI_ID:HGNC:3271 HGNC:6159
UniProt_ID:J9R021 Q05BS0 Q14152 Q24JU4 Q3B770 Q6P1R0 Q7Z5T5
Nearer transcript ids and distances:
    Gene_name:EIF3A
    Gene_symbol:EIF3A EIF6
    Gene_synonyms:KIAA0139 TIF32 b(2)gcn eIF3-p170 eIF3-theta p27BBP
    Gene_source:HGNC:3271 HGNC:6159



    TATA-Box annotation


    Distance to TSS:23
    Nearest PromoterID:NM_003750
    Entrez ID:8661
    Nearest Unigene:Hs.523299
    Nearest Refseq:NM_003750
    Nearest Ensembl:ENSG00000107581
    Gene Name:EIF3A
    Gene Alias:EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185
    Gene Type:protein-coding
    CpG%:0.112994
    GC%:0.730337
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.