rfhg_142214.1

From referenceTSS
Revision as of 03:37, 7 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_142214.1
Species:human
Chr:chr11
Start:94740306
End:94740351
Strand:-
Source datasetsPRJNA548673
ProtocolReCappable-seq
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2484803,EH38E1562093)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000537874.1:-4
GeneID:105369438
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:LOC105369438
    Gene_symbol:PIWIL4-AS1
    Gene_synonyms:
    Gene_source:EntrezGene:105369438



    TATA-Box annotation


    Distance to TSS:27
    Nearest PromoterID:NR_135093
    Entrez ID:105369438
    Nearest Unigene:Hs.568921
    Nearest Refseq:NR_135093
    Nearest Ensembl:ENSG00000255929
    Gene Name:LOC105369438
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.044444
    GC%:0.456522
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.