rfhg_148912.1

From referenceTSS
Revision as of 05:46, 7 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_148912.1
TSS ID(Version3):hg_124838.1
hg_124839.1
Species:human
Chr:chr12
Start:27332853
End:27332935
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844
ProtocolCAGE|NETCAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2542068,EH38E1601002)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000544915.5:0
ENST00000395901.6:0
ENST00000546179.5:0
AF256215:0
AK296706:0
GeneID:56938
HGNC/MGI_ID:HGNC:18984
UniProt_ID:Q8WYA1
Nearer transcript ids and distances:
    Gene_name:ARNTL2
    Gene_symbol:BMAL2
    Gene_synonyms:CLIF MOP9 PASD9 bHLHe6
    Gene_source:HGNC:18984



    TATA-Box annotation


    Distance to TSS:58
    Nearest PromoterID:NM_020183
    Entrez ID:56938
    Nearest Unigene:Hs.445447
    Nearest Refseq:NM_020183
    Nearest Ensembl:ENSG00000029153
    Gene Name:ARNTL2
    Gene Alias:BMAL2|CLIF|MOP9|PASD9|bHLHe6
    Gene Type:protein-coding
    CpG%:0.146341
    GC%:0.783133
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.