rfhg_14989.1

Basic information about the TSS

---

TSS ID: rfhg_14989.1 TSS ID(Version3): hg_6200.1 Species: human Chr: chr1		Start: 161118075 End: 161118135 Strand: +
Source datasets	FANTOM5|PRJDB5282|PRJNA4843412|DRA013844|PRJNA401781 |PRJNA548673|PRJNA615891
Protocol	CAGE|C1CAGE|NETCAGE|oligo_capping|RAMPAGE|ReCappable-seq |SLIC_CAGE|TIF-seq2
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D2230796,EH38E1391074)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000496768.5:0 ENST00000479266.5:0 ENST00000368009.7:0 ENST00000477684.5:0 ENST00000486962.5:0 ENST00000368007.8:0 ENST00000492411.5:0 ENST00000392190.9:0 ENST00000368008.5:0 ENST00000473918.1:0 AF069987:0 AK313323:0 BC046149:0 GeneID: 4817 HGNC/MGI_ID: HGNC:7828 UniProt_ID: B2R8D1 Q86X76 Nearer transcript ids and distances:

Gene_name: NIT1 Gene_symbol: NIT1 Gene_synonyms: Gene_source: HGNC:7828

TATA-Box annotation

---

Distance to TSS:	0
Nearest PromoterID:	NM_001185092
Entrez ID:	4817
Nearest Unigene:	Hs.146406
Nearest Refseq:	NM_005600
Nearest Ensembl:	ENSG00000158793
Gene Name:	NIT1
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.150000
GC%:	0.721311
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.