rfhg_175648.1

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Basic information about the TSS


TSS ID:rfhg_175648.1
Species:human
Chr:chr15
Start:67146933
End:67146974
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2802384,EH38E1772188)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000558463.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:SMAD3
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:8932
    Nearest PromoterID:NM_001145103
    Entrez ID:4088
    Nearest Unigene:Hs.727986
    Nearest Refseq:NM_005902
    Nearest Ensembl:ENSG00000166949
    Gene Name:SMAD3
    Gene Alias:HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3
    Gene Type:protein-coding
    CpG%:0.024390
    GC%:0.595238
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):