rfhg_19957.1

Basic information about the TSS

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TSS ID: rfhg_19957.1 TSS ID(Version3): hg_8595.1 Species: human Chr: chr1		Start: 218285284 End: 218285342 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA615891|PRJNA597322 |PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781|PRJNA548673
Protocol	CAGE|TSS_database|TIF-seq2|STRIPE-seq|NETCAGE|C1CAGE |RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2277723,EH38E1422938)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000366932.4:0 ENST00000491428.1:0 AK290066:0 BC003668:0 BC020641:0 GeneID: 51018 HGNC/MGI_ID: HGNC:24255 UniProt_ID: A0JLN3 A8K201 Q9Y3B9 Nearer transcript ids and distances:

Gene_name: RRP15 Gene_symbol: RRP15 Gene_synonyms: CGI-115 Gene_source: HGNC:24255

TATA-Box annotation

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Distance to TSS:	20
Nearest PromoterID:	NM_016052
Entrez ID:	51018
Nearest Unigene:	Hs.660109
Nearest Refseq:	NM_016052
Nearest Ensembl:	ENSG00000067533
Gene Name:	RRP15
Gene Alias:	CGI-115|KIAA0507
Gene Type:	protein-coding
CpG%:	0.120690
GC%:	0.644068
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.