rfhg_216906.1

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Basic information about the TSS


TSS ID:rfhg_216906.1
Species:human
Chr:chr19
Start:58544102
End:58544117
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3077534,EH38E1966428)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:TRIM28
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:45
    Nearest PromoterID:NM_005762
    Entrez ID:10155
    Nearest Unigene:Hs.467408
    Nearest Refseq:NM_005762
    Nearest Ensembl:ENSG00000130726
    Gene Name:TRIM28
    Gene Alias:KAP1|PPP1R157|RNF96|TF1B|TIF1B
    Gene Type:protein-coding
    CpG%:0.133333
    GC%:0.687500
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):