rfhg_24711.1

From referenceTSS
Revision as of 09:57, 8 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_24711.1
Species:human
Chr:chr2
Start:28751591
End:28751613
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3103675,EH38E1983901)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_206876.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:PPP1CB
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-146
    Nearest PromoterID:NM_206876
    Entrez ID:5500
    Nearest Unigene:Hs.702907
    Nearest Refseq:NM_002709
    Nearest Ensembl:ENSG00000213639
    Gene Name:PPP1CB
    Gene Alias:HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD
    Gene Type:protein-coding
    CpG%:0.181818
    GC%:0.782609
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):