rfhg_3488.1

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Basic information about the TSS


TSS ID:rfhg_3488.1
Species:human
Chr:chr1
Start:24929378
End:24929395
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2140250,EH38E1329121)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RUNX3
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:890
    Nearest PromoterID:NM_004350
    Entrez ID:864
    Nearest Unigene:Hs.170019
    Nearest Refseq:NM_004350
    Nearest Ensembl:ENSG00000020633
    Gene Name:RUNX3
    Gene Alias:AML2|CBFA3|PEBP2aC
    Gene Type:protein-coding
    CpG%:0.058824
    GC%:0.388889
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):