rfhg_4213.1

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Basic information about the TSS


TSS ID:rfhg_4213.1
Species:human
Chr:chr1
Start:28236413
End:28236458
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2143837,EH38E1332121)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF356908:-466
MA592485:-466
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:ATP5IF1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:311
    Nearest PromoterID:NM_178190
    Entrez ID:93974
    Nearest Unigene:Hs.744914
    Nearest Refseq:NM_016311
    Nearest Ensembl:ENSG00000130770
    Gene Name:ATP5IF1
    Gene Alias:ATPI|ATPIF1|ATPIP|IP
    Gene Type:protein-coding
    CpG%:0.066667
    GC%:0.521739
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):