rfhg_51438.1

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Basic information about the TSS


TSS ID:rfhg_51438.1
TSS ID(Version3):hg_240058.1
Species:human
Chr:chr3
Start:149377727
End:149377732
Strand:-
Source datasetsENCODE|PRJNA615891|PRJNA548673
ProtocolCAGE|TIF-seq2|SLIC_CAGE|ReCappable-seq
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3499237,EH38E2247169)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC034145:-10
GeneID:4071
HGNC/MGI_ID:HGNC:11853
UniProt_ID:Q8NE91
Nearer transcript ids and distances:
    Gene_name:TM4SF1-AS1
    Gene_symbol:TM4SF1
    Gene_synonyms:L6
    Gene_source:HGNC:11853



    TATA-Box annotation


    Distance to TSS:-49
    Nearest PromoterID:NR_109809
    Entrez ID:100874091
    Nearest Unigene:Hs.549633
    Nearest Refseq:NR_046650
    Nearest Ensembl:ENSG00000240541
    Gene Name:TM4SF1-AS1
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.333333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.