rfhg_70574.1

Basic information about the TSS

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TSS ID: rfhg_70574.1 Species: human Chr: chr5		Start: 103120107 End: 103120145 Strand: -
Source datasets	PRJNA401781|PRJNA615891|PRJNA548673|PRJDB5282|PRJNA4843412 |DRA013844
Protocol	RAMPAGE|TIF-seq2|CAGE|oligo_capping|ReCappable-seq |SLIC_CAGE|C1CAGE|NETCAGE
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3738098,EH38E2395324)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000512248.5:0 ENST00000399004.7:0 ENST00000513603.1:0 CR627424:0 AK295796:0 AK225572:0 AK000132:0 GeneID: 54826 HGNC/MGI_ID: HGNC:25959 UniProt_ID: Q9NXP7 Nearer transcript ids and distances:

Gene_name: GIN1 Gene_symbol: GIN1 Gene_synonyms: FLJ20125 GIN-1 TGIN1 Gene_source: HGNC:25959

TATA-Box annotation

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Distance to TSS:	12
Nearest PromoterID:	NM_001317954
Entrez ID:	54826
Nearest Unigene:	Hs.24088
Nearest Refseq:	NM_017676
Nearest Ensembl:	ENSG00000145723
Gene Name:	GIN1
Gene Alias:	GIN-1|TGIN1|ZH2C2
Gene Type:	protein-coding
CpG%:	0.131579
GC%:	0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.