rfhg_86506.1

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Basic information about the TSS


TSS ID:rfhg_86506.1
Species:human
Chr:chr6
Start:116511996
End:116512022
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3890230,EH38E2496766)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ895904:-300
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:CALHM5
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:370
    Nearest PromoterID:NM_153711
    Entrez ID:254228
    Nearest Unigene:Hs.105081
    Nearest Refseq:NM_153711
    Nearest Ensembl:ENSG00000178033
    Gene Name:CALHM5
    Gene Alias:C6orf188|FAM26E|dJ493F7.3
    Gene Type:protein-coding
    CpG%:0.038462
    GC%:0.555556
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):