rfmm_120130.1

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Basic information about the TSS


TSS ID:rfmm_120130.1
Species:mouse
Chr:chr12
Start:110807456
End:110807471
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2421429,EM10E1000060)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000181348.2:0
AK014831:0
GeneID:66709
HGNC/MGI_ID:MGI:1913959
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:4921507G05Rik
    Gene_symbol:4921507G05Rik
    Gene_synonyms:
    Gene_source:MGI:1913959



    TATA-Box annotation


    Distance to TSS:0
    Nearest PromoterID:NR_152102.1
    Entrez ID:4921507G05Rik
    Nearest Unigene:NR_152102
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:4921507G05Rik
    Gene Alias:
    Gene Type:
    CpG%:0.200000
    GC%:0.750000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.