rfmm_1211.1

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Basic information about the TSS


TSS ID:rfmm_1211.1
Species:mouse
Chr:chr1
Start:38875758
End:38875779
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1049728,EM10E0435242)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001029878.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Lonrf2
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:0
    Nearest PromoterID:NM_001029878.2
    Entrez ID:Lonrf2
    Nearest Unigene:NM_001029878
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Lonrf2
    Gene Alias:
    Gene Type:
    CpG%:0.047619
    GC%:0.409091
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):