rfmm_69854.1

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Basic information about the TSS


TSS ID:rfmm_69854.1
Species:mouse
Chr:chr7
Start:81984943
End:81984967
Strand:+
Source datasetsFANTOM5|EPD|DRA000914
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2875999,EM10E1187270)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000173287.8:-3
GeneID:269959
HGNC/MGI_ID:MGI:3028499
UniProt_ID:G3UXC7
Nearer transcript ids and distances:
    Gene_name:Adamtsl3
    Gene_symbol:Adamtsl3
    Gene_synonyms:9230119C12Rik punctin-2
    Gene_source:MGI:3028499



    TATA-Box annotation


    Distance to TSS:53
    Nearest PromoterID:NM_001190374.1
    Entrez ID:Adamtsl3
    Nearest Unigene:XM_006507894
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Adamtsl3
    Gene Alias:
    Gene Type:
    CpG%:0.166667
    GC%:0.800000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.