rfmm_73781.1

From referenceTSS
Revision as of 07:29, 23 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_73781.1
Species:mouse
Chr:chr7
Start:128858752
End:128858780
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2890578,EM10E1193506)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000094018.6:0
ENSMUST00000206551.2:0
ENSMUST00000206918.2:0
ENSMUST00000205630.2:0
ENSMUST00000205896.2:0
AK081292:0
GeneID:381925
HGNC/MGI_ID:MGI:2685936
UniProt_ID:A0A0U1RP67 A0A0U1RPE2 Q0VBU9
Nearer transcript ids and distances:
    Gene_name:Plpp4
    Gene_symbol:Plpp4
    Gene_synonyms:C030048B12Rik LOC381925 Ppapdc1a
    Gene_source:MGI:2685936



    TATA-Box annotation


    Distance to TSS:-52
    Nearest PromoterID:NM_001080963.1
    Entrez ID:Plpp4
    Nearest Unigene:XM_036153203
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Plpp4
    Gene Alias:
    Gene Type:
    CpG%:0.142857
    GC%:0.793103
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.