rfhg_112268.1

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Basic information about the TSS


TSS ID:rfhg_112268.1
TSS ID(Version3):hg_95442.1
hg_95443.1
Species:human
Chr:chr8
Start:143021776
End:143021921
Strand:-
Source datasetsFANTOM5|RAMPAGE|PRJDB5282
ProtocolCAGE|RAMPAGE|C1CAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D4161035,EH38E2674823)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF337045:-42
MA572622:-42
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF337042:123
  • MA572619:123
  • LF385047:-489
  • MA620624:-489
view more...
Gene_name:LY6E
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:3319
Nearest PromoterID:NM_002346
Entrez ID:4061
Nearest Unigene:Hs.521903
Nearest Refseq:NM_002346
Nearest Ensembl:ENSG00000160932
Gene Name:LY6E
Gene Alias:RIG-E|RIGE|SCA-2|SCA2|TSA-1
Gene Type:protein-coding
CpG%:0.020690
GC%:0.650685
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):