rfhg_157543.1

From referenceTSS
Revision as of 10:17, 8 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_157543.1
Species:human
Chr:chr12
Start:122063388
End:122063431
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2617047,EH38E1651316)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000660647.1:0
GeneID:100506691
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000540968.1:-39
  • ENST00000538790.1:-82
  • NR_135044.1:-98
view more...
Gene_name:LOC100506691
Gene_symbol:LINC02985
Gene_synonyms:
Gene_source:EntrezGene:100506691



TATA-Box annotation


Distance to TSS:119
Nearest PromoterID:NR_135044
Entrez ID:100506691
Nearest Unigene:Hs.536336
Nearest Refseq:NR_135044
Nearest Ensembl:ENSG00000256546
Gene Name:LOC100506691
Gene Alias:-
Gene Type:ncRNA
CpG%:0.023256
GC%:0.568182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.