rfhg_157678.1

From referenceTSS
Revision as of 11:35, 8 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_157678.1
Species:human
Chr:chr12
Start:122888641
End:122888665
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2617848,EH38E1651936)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000623210.1:-55
AK022083:-55
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:VPS37B
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:7471
    Nearest PromoterID:NM_024667
    Entrez ID:79720
    Nearest Unigene:Hs.507162
    Nearest Refseq:NM_024667
    Nearest Ensembl:ENSG00000139722
    Gene Name:VPS37B
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.480000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):