rfhg_172600.1

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Basic information about the TSS


TSS ID:rfhg_172600.1
Species:human
Chr:chr15
Start:39589000
End:39589043
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2778773,EH38E1755137)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF348730:0
MA584307:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF348732:-43
  • MA584309:-43
  • ENST00000616754.1:118
  • LF348734:-266
  • MA584311:-266
view more...
Gene_name:THBS1
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:7942
Nearest PromoterID:NM_003246
Entrez ID:7057
Nearest Unigene:Hs.164226
Nearest Refseq:NM_003246
Nearest Ensembl:ENSG00000137801
Gene Name:THBS1
Gene Alias:THBS|THBS-1|TSP|TSP-1|TSP1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.568182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):