rfhg_179404.1

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Basic information about the TSS


TSS ID:rfhg_179404.1
Species:human
Chr:chr16
Start:787873
End:787873
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2835205,EH38E1795111)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000561734.5:-108
GeneID:113000
HGNC/MGI_ID:HGNC:14173
UniProt_ID:Q9UJJ7
Nearer transcript ids and distances:
  • DQ892918:134
  • DQ896167:134
  • BC011783:136
  • ENST00000562070.1:404
  • ENST00000563560.1:-456
  • ENST00000567283.5:-460
  • ENST00000569601.5:-461
  • ENST00000565503.5:-467
  • ENST00000565809.5:-498
view more...
Gene_name:RPUSD1
Gene_symbol:RPUSD1
Gene_synonyms:MGC19600 RLUCL
Gene_source:HGNC:14173



TATA-Box annotation


Distance to TSS:508
Nearest PromoterID:NM_001324413
Entrez ID:113000
Nearest Unigene:Hs.101742
Nearest Refseq:NM_058192
Nearest Ensembl:ENSG00000007376
Gene Name:RPUSD1
Gene Alias:C16orf40|RLUCL
Gene Type:protein-coding
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.