rfhg_183233.1

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Basic information about the TSS


TSS ID:rfhg_183233.1
Species:human
Chr:chr16
Start:31034018
End:31034063
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2859160,EH38E1811940)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF370035:-199
MA605612:-199
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF207922:-254
  • MA443499:-254
  • LF370034:311
  • MA605611:311
view more...
Gene_name:STX4
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:482
Nearest PromoterID:NM_004604
Entrez ID:6810
Nearest Unigene:Hs.83734
Nearest Refseq:NM_004604
Nearest Ensembl:ENSG00000103496
Gene Name:STX4
Gene Alias:STX4A|p35-2
Gene Type:protein-coding
CpG%:0.111111
GC%:0.652174
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):