rfhg_3199.1

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Basic information about the TSS


TSS ID:rfhg_3199.1
Species:human
Chr:chr1
Start:23193514
End:23193526
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2138448,EH38E1327598)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:HTR1D
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:1209
    Nearest PromoterID:NM_000864
    Entrez ID:3352
    Nearest Unigene:Hs.121482
    Nearest Refseq:NM_000864
    Nearest Ensembl:ENSG00000179546
    Gene Name:HTR1D
    Gene Alias:5-HT1D|HT1DA|HTR1DA|HTRL|RDC4
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.538462
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):