rfhg_41194.1

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Basic information about the TSS


TSS ID:rfhg_41194.1
Species:human
Chr:chr2
Start:239401700
End:239401737
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3265174,EH38E2089192)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_135576.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LQ980501:-7
  • ENST00000428471.1:11
  • NR_135577.1:11
  • AB372706:21
  • LQ980518:24
  • ENST00000670479.1:25
  • ENST00000413029.1:68
  • ENST00000409526.1:-264
  • NR_135575.1:-264
view more...
Gene_name:HDAC4-AS1
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NR_135576
Entrez ID:101928111
Nearest Unigene:Hs.534680
Nearest Refseq:NR_135575
Nearest Ensembl:ENSG00000222020
Gene Name:HDAC4-AS1
Gene Alias:-
Gene Type:ncRNA
CpG%:0.135135
GC%:0.789474
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):