rfhg_67681.1

Basic information about the TSS

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TSS ID: rfhg_67681.1 Species: human Chr: chr5		Start: 55307634 End: 55307709 Strand: -
Source datasets	PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891 |PRJDB5282|PRJNA597322
Protocol	NETCAGE|CAGE|ReCappable-seq|SLIC_CAGE|RAMPAGE|C1CAGE |STRIPE-seq|oligo_capping|TIF-seq2
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3703620,EH38E2372625)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000251636.10:0 ENST00000621106.4:0 ENST00000504778.5:0 NM_001345965.2:0 NM_019030.4:0 NM_001345964.2:0 NR_144324.2:0 NR_144323.2:0 NR_144325.2:0 BC056219:0 AY036974:0 BX649135:0 AK308332:0 GeneID: 54505 HGNC/MGI_ID: HGNC:15815 UniProt_ID: A0A087WYN9 Q7Z478 Nearer transcript ids and distances: KJ898995:60 AB590960:60 ENST00000508346.1:94 BX648269:227 view more...

Gene_name: DHX29 Gene_symbol: DHX29 Gene_synonyms: Gene_source: HGNC:15815

TATA-Box annotation

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Distance to TSS:	23
Nearest PromoterID:	NM_001345964
Entrez ID:	54505
Nearest Unigene:	Hs.593268
Nearest Refseq:	NM_019030
Nearest Ensembl:	ENSG00000067248
Gene Name:	DHX29
Gene Alias:	DDX29
Gene Type:	protein-coding
CpG%:	0.120000
GC%:	0.723684
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.