rfmm_141601.1

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Basic information about the TSS


TSS ID:rfmm_141601.1
Species:mouse
Chr:chr16
Start:8498676
End:8498681
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000201722.2:-42
NM_001324517.1:-42
BC100524:-42
GeneID:436336
HGNC/MGI_ID:MGI:3643507
UniProt_ID:A0A0J9YTU8
Nearer transcript ids and distances:
    Gene_name:Gm5767
    Gene_symbol:Litafd
    Gene_synonyms:Gm43786 Gm5767
    Gene_source:MGI:3643507



    TATA-Box annotation


    Distance to TSS:44
    Nearest PromoterID:NM_001324517.1
    Entrez ID:Gm5767
    Nearest Unigene:XM_030249172
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Gm5767
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.