rfmm_1948.1

Basic information about the TSS

TSS ID:	rfmm_1948.1
Species:	mouse
Chr:	chr1

Start:	54596755
End:	54596857
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2272070,EM10E0935756)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000097739.5:0 ENSMUST00000185817.2:0 ENSMUST00000189506.2:0 NM_001163314.2:0 AK138171:0 AK041133:0 AK051360:0 AK051866:0
GeneID:	241062
HGNC/MGI_ID:	MGI:2443342
UniProt_ID:	Q3UUQ7 Q8BPZ2
Nearer transcript ids and distances:

Gene_name:	Pgap1
Gene_symbol:	Pgap1
Gene_synonyms:	5033403E17Rik 9030223K07Rik D230012E17Rik PGAP1 oto
Gene_source:	MGI:2443342

TATA-Box annotation

Distance to TSS:	37
Nearest PromoterID:	NM_001163314.2
Entrez ID:	Pgap1
Nearest Unigene:	NM_001163314
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Pgap1
Gene Alias:
Gene Type:
CpG%:	0.098039
GC%:	0.689320
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.