rfmm_69941.1

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Basic information about the TSS


TSS ID:rfmm_69941.1
Species:mouse
Chr:chr7
Start:83533007
End:83533038
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2876539,EM10E1187479)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF293837:160
MA529414:160
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK184715:162
  • AK162446:-397
  • AK190998:416
  • BC018326:449
  • AK084510:-456
  • AK089082:-465
  • ENSMUST00000094216.5:-475
  • AK036338:-475
view more...
Gene_name:Mesd
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-52
Nearest PromoterID:NM_001374090.1
Entrez ID:Mesd
Nearest Unigene:NR_164325
Nearest Refseq:
Nearest Ensembl:
Gene Name:Mesd
Gene Alias:
Gene Type:
CpG%:0.096774
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):20(CGCCCTAAGAGC,-,0.00)