rfmm_74924.1

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Basic information about the TSS


TSS ID:rfmm_74924.1
Species:mouse
Chr:chr7
Start:141055242
End:141055280
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2895443,EM10E1195514)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_025593.1:176
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000043870.9:197
  • AK149137:197
view more...
Gene_name:Tspan4
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:112
Nearest PromoterID:NM_053082.3
Entrez ID:Tspan4
Nearest Unigene:XM_030242865
Nearest Refseq:
Nearest Ensembl:
Gene Name:Tspan4
Gene Alias:
Gene Type:
CpG%:0.131579
GC%:0.769231
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):