rfhg_100940.1

From referenceTSS
Revision as of 18:34, 22 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=intron (ENST00000473341.5, intron 1 of 10) |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EH38D4039134,EH38E2596118) |chr=chr7 |cpg_percent=0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfhg_100940.1
Species:human
Chr:chr7
Start:140062279
End:140062296
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:pELS,CTCF-bound (EH38D4039134,EH38E2596118)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:263
    Nearest PromoterID:ENST00000467638.1
    Entrez ID:ENSG00000059378
    Nearest Unigene:ENST00000263549
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.000000
    GC%:0.294118
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_100940.1&oldid=1989427"