rfhg_116390.1

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Basic information about the TSS


TSS ID:rfhg_116390.1
Species:human
Chr:chr9
Start:88065550
End:88065565
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK124340:0
GeneID:100131068
HGNC/MGI_ID:HGNC:39052
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:endogenous retrovirus group I member 1
    Gene_symbol:ERVI-1
    Gene_synonyms:
    Gene_source:HGNC:39052



    TATA-Box annotation


    Distance to TSS:-1357
    Nearest PromoterID:ENST00000442490.3
    Entrez ID:ENSG00000225385
    Nearest Unigene:ENST00000442490
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:endogenous retrovirus group I member 1
    Gene Alias:
    Gene Type:processed_pseudogene
    CpG%:0.071429
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.