rfhg_116454.1

From referenceTSS
Revision as of 23:58, 22 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=Intergenic |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EH38D4208388,EH38E2705200) |chr=chr9 |cpg_percent=0.043478 |detailed_annotation=Int...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfhg_116454.1
TSS ID(Version3):hg_101286.1
Species:human
Chr:chr9
Start:89180336
End:89180406
Strand:-
Source datasets
Protocol
TSS cluster detected*

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:pELS,CTCF-bound (EH38D4208388,EH38E2705200)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:-1604
    Nearest PromoterID:ENST00000375835.8
    Entrez ID:ENSG00000148082
    Nearest Unigene:ENST00000375835
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.043478
    GC%:0.471429
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_116454.1&oldid=2006644"