rfhg_194013.1

From referenceTSS
Revision as of 04:08, 24 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000585355.5) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D2933043,EH38E1863882) |chr=chr17 |cpg_percent=0.107296 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_194013.1
TSS ID(Version3):hg_166191.1
Species:human
Chr:chr17
Start:42798485
End:42798719
Strand:-
Source datasets
Protocol
TSS cluster detected*

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2933043,EH38E1863882)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000586680.1:0
ENST00000328434.8:0
AK295023:0
BC002698:0
AF070665:0
AK225611:0
AK290863:0
GeneID:28958
HGNC/MGI_ID:HGNC:24990
UniProt_ID:A0A024R1X4 B7Z2R6 K7EPV0
Nearer transcript ids and distances:
    Gene_name:cytochrome c oxidase assembly factor 3
    Gene_symbol:COA3
    Gene_synonyms:COX25 HSPC009 MITRAC12 hCOA3
    Gene_source:HGNC:24990



    TATA-Box annotation


    Distance to TSS:88
    Nearest PromoterID:ENST00000586680.1
    Entrez ID:ENSG00000183978
    Nearest Unigene:ENST00000586680
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:cytochrome c oxidase assembly factor 3
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.107296
    GC%:0.666667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.