rfhg_222837.1

From referenceTSS
Revision as of 14:37, 24 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000361300.4) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EH38D3317876,EH38E2126410) |chr=chr20 |cpg_percent=0.000000 |de...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfhg_222837.1
Species:human
Chr:chr20
Start:59721219
End:59721231
Strand:+
Source datasets
Protocol
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS,CTCF-bound (EH38D3317876,EH38E2126410)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:NM_183246.2:0
NM_183244.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:15
    Nearest PromoterID:ENST00000395636.6
    Entrez ID:ENSG00000087495
    Nearest Unigene:ENST00000355648
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_222837.1&oldid=2124724"