rfmm_102795.1

From referenceTSS
Revision as of 14:54, 25 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000128996.2) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EM10D2353866,EM10E0969793) |chr=chr11 |cpg_percent=0.083333...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_102795.1
Species:mouse
Chr:chr11
Start:23017992
End:23018005
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2353866,EM10E0969793)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000128996.2 AK048366 KY467573
Distance:0
GeneID:100042875
HGNC/MGI_ID:MGI:3649372
UniProt_ID:
Gene_name:predicted gene 12059
Gene_symbol:Gm12059
Gene_synonyms:
Gene_source:MGI:3649372



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:ENSMUST00000128996.2
Entrez ID:ENSMUSG00000085665
Nearest Unigene:ENSMUST00000128996
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene 12059
Gene Alias:
Gene Description:
Gene Type:lncRNA
CpG%:0.083333
GC%:0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.