rfmm_113121.1

From referenceTSS
Revision as of 18:36, 25 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000130963.2) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EM10D2387964,EM10E0986049) |chr=chr11 |cpg_percent=0.100000...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_113121.1
Species:mouse
Chr:chr11
Start:114142702
End:114142713
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2387964,EM10E0986049)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000130963.2 AK132953
Distance:-34
GeneID:100038601
HGNC/MGI_ID:MGI:3652328
UniProt_ID:Q3V0R3
Gene_name:predicted gene 11691
Gene_symbol:Gm11691
Gene_synonyms:
Gene_source:MGI:3652328



TATA-Box annotation


Distance to TSS:39
Nearest PromoterID:ENSMUST00000130963.2
Entrez ID:ENSMUSG00000075431
Nearest Unigene:ENSMUST00000130963
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene 11691
Gene Alias:
Gene Description:
Gene Type:lncRNA
CpG%:0.100000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.