rfmm_115440.1

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Basic information about the TSS


TSS ID:rfmm_115440.1
Species:mouse
Chr:chr12
Start:18564443
End:18564447
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1284615,EM10E0532298)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000177778.9:64
AK017753:64
GeneID:236366
HGNC/MGI_ID:MGI:1917882
UniProt_ID:J3QPX0
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 5730507C01 gene
    Gene_symbol:5730507C01Rik
    Gene_synonyms:
    Gene_source:MGI:1917882



    TATA-Box annotation


    Distance to TSS:-66
    Nearest PromoterID:ENSMUST00000177778.9
    Entrez ID:ENSMUSG00000073197
    Nearest Unigene:ENSMUST00000063216
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 5730507C01 gene
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.333333
    GC%:0.750000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.