rfmm_2148.1

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Basic information about the TSS


TSS ID:rfmm_2148.1
Species:mouse
Chr:chr1
Start:58750621
End:58750632
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2273321,EM10E0936220)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001289704.3:18
NM_001293804.2:18
NR_149257.1:18
NR_149258.1:18
NR_149256.1:18
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-40
    Nearest PromoterID:ENSMUST00000140940.8
    Entrez ID:ENSMUSG00000026031
    Nearest Unigene:ENSMUST00000114313
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:protein_coding
    CpG%:0.000000
    GC%:0.636364
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):