rfmm_2249.1

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Basic information about the TSS


TSS ID:rfmm_2249.1
Species:mouse
Chr:chr1
Start:59158981
End:59159020
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2273460,EM10E0936292)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000180570.2 ENSMUST00000189096.2 AK144579
Distance:0
GeneID:100038354
HGNC/MGI_ID:MGI:3641700
UniProt_ID:Q3UN03
Gene_name:RIKEN cDNA G730003C15 gene
Gene_symbol:G730003C15Rik
Gene_synonyms:
Gene_source:MGI:3641700



TATA-Box annotation


Distance to TSS:9
Nearest PromoterID:ENSMUST00000189096.2
Entrez ID:ENSMUSG00000097573
Nearest Unigene:ENSMUST00000180570
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA G730003C15 gene
Gene Alias:
Gene Description:
Gene Type:lncRNA
CpG%:0.157895
GC%:0.743590
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.