rfmm_68388.1

From referenceTSS
Revision as of 09:46, 27 February 2023 by Autoedit (talk | contribs) (Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENSMUST00000107589.8) |ccre_category=PLS |ccre_description=PLS,CTCF-bound (EM10D2867930,EM10E1184050) |chr=chr7 |cpg_percent=0.125000 |...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_68388.1
Species:mouse
Chr:chr7
Start:51511964
End:51512029
Strand:-
Source datasets
Protocol
TSS cluster detected*6

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2867930,EM10E1184050)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000169357.2
Distance:0
GeneID:100040608
HGNC/MGI_ID:MGI:3689889
UniProt_ID:E9Q5Z5
Gene_name:Fanconi anemia, complementation group F
Gene_symbol:Fancf
Gene_synonyms:
Gene_source:MGI:3689889



TATA-Box annotation


Distance to TSS:18
Nearest PromoterID:ENSMUST00000169357.2
Entrez ID:ENSMUSG00000092118
Nearest Unigene:ENSMUST00000169357
Nearest Refseq:
Nearest Ensembl:
Gene Name:Fanconi anemia, complementation group F
Gene Alias:
Gene Description:
Gene Type:protein_coding
CpG%:0.125000
GC%:0.661538
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.