rfmm_995.1

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Basic information about the TSS


TSS ID:rfmm_995.1
Species:mouse
Chr:chr1
Start:36596776
End:36596812
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2267839,EM10E0934010)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000194426.2:0
AK047283:0
AK052512:0
GeneID:319678
HGNC/MGI_ID:MGI:2442526
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA D430040D24 gene
    Gene_symbol:D430040D24Rik
    Gene_synonyms:
    Gene_source:MGI:2442526



    TATA-Box annotation


    Distance to TSS:12
    Nearest PromoterID:ENSMUST00000194426.2
    Entrez ID:ENSMUSG00000087589
    Nearest Unigene:ENSMUST00000149224
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA D430040D24 gene
    Gene Alias:
    Gene Type:lncRNA
    CpG%:0.114286
    GC%:0.583333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.