rfhg_37044.1

From referenceTSS
Revision as of 12:16, 24 June 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_37044.1
Species:human
Chr:chr2
Start:197434990
End:197435005
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3228496,EH38E2064013)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF317756:0
MA553333:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:SF3B1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:96
    Nearest PromoterID:NM_012433
    Entrez ID:23451
    Nearest Unigene:Hs.632554
    Nearest Refseq:NM_012433
    Nearest Ensembl:ENSG00000115524
    Gene Name:SF3B1
    Gene Alias:Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155
    Gene Type:protein-coding
    CpG%:0.066667
    GC%:0.437500
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):