rfhg_68572.1

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Basic information about the TSS


TSS ID:rfhg_68572.1
Species:human
Chr:chr5
Start:70925082
End:70925094
Strand:+
Source datasets
Protocol
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000380707.9:0
GeneID:6606
HGNC/MGI_ID:HGNC:11117
UniProt_ID:Q16637
Nearer transcript ids and distances:
    Gene_name:SMN2
    Gene_symbol:SMN1
    Gene_synonyms:BCD541 GEMIN1 SMA1 SMA2 SMA3 SMNT TDRD16A
    Gene_source:HGNC:11117



    TATA-Box annotation


    Distance to TSS:147
    Nearest PromoterID:NM_022876
    Entrez ID:6607
    Nearest Unigene:Hs.202179
    Nearest Refseq:NM_017411
    Nearest Ensembl:ENSG00000205571
    Gene Name:SMN2
    Gene Alias:BCD541|C-BCD541|GEMIN1|SMNC|TDRD16B
    Gene Type:protein-coding
    CpG%:0.166667
    GC%:0.846154
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.