rfhg_73183.1

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Basic information about the TSS


TSS ID:rfhg_73183.1
TSS ID(Version3):hg_58988.1
Species:human
Chr:chr5
Start:141330483
End:141330536
Strand:+
Source datasets
Protocol
TSS cluster detected*

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3767958,EH38E2414638)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000517417.3:0
GeneID:56114
HGNC/MGI_ID:HGNC:8696
UniProt_ID:Q9Y5H4
Nearer transcript ids and distances:
    Gene_name:PCDHGA1
    Gene_symbol:PCDHGA1
    Gene_synonyms:PCDH-GAMMA-A1
    Gene_source:HGNC:8696



    TATA-Box annotation


    Distance to TSS:-176
    Nearest PromoterID:NM_018912
    Entrez ID:56114
    Nearest Unigene:Hs.368160
    Nearest Refseq:NM_018912
    Nearest Ensembl:ENSG00000204956
    Gene Name:PCDHGA1
    Gene Alias:PCDH-GAMMA-A1
    Gene Type:protein-coding
    CpG%:0.037736
    GC%:0.425926
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.